Simulations, folds and complexes from our own runs. Every tile is real
output, rendered from the coordinates or recorded from the trajectory it names.
A designed VHH on its target, 300 ns of explicit-solvent simulationAn Fv folding from its sequence, frame by frame, in our own folder
A second design against the same epitopeA third design, over the same run lengthA fourth design, first replicaThe same fourth design on a second replica, which is how we read replica spreadA fifth design against the same siteA sixth design, first replicaA co-folded complex: the target in forest, the designed binder in gold, and the epitope it lands on picked out in pale greenA second designed binder against the same targetA third, meeting the target across a broad epitopeA fourth design, co-folded the same way
